Studies at the Intersection of Ribosome Function and Cellular Homeostasis

The ribosome is a complex molecular machine that translates the genetic code into functional polypeptides. Our work focuses on understanding how the ribosome functions at a molecular level and how changes in its activity lead to mRNA quality control and the induction of cellular stress responses. Work in the Green lab ranges widely in scope, from detailed mechanistic questions in ribosome rescue to surveying global changes in gene expression and dissecting the complex interplay of mammalian signaling pathways. We use a wide range of genetic, genomic, and biochemical approaches to explore these questions in bacteria, yeast, and increasingly in mammalian systems. Much of our ongoing work focuses on the importance of ribosome collisions in activating signaling pathways such as the integrated stress response (ISR) and various MAP kinase cascades.

Watch Rachel Green’s iBiology.org video explaining Protein Synthesis at https://www.ibiology.org/biochemistry/protein-synthesis/

Click on each figure to read more!

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EDF1 coordinates cellular responses to ribosome collisions

Ribosome collisions trigger general stress responses to regulate cell fate

 

Ribosome collisions induce mRNA cleavage and ribosome rescue in bacteria

 

Translational repression of NMD targets by GIGYF2 and EIF4E2

 

Live-cell imaging reveals kinetic determinants of quality control triggered by ribosome stalling

 

Translational initiation in E. coli occurs at the correct sites genome-wide in the absence of mRNA-rRNA base-pairing

 

High-resolution ribosome profiling defines discrete ribosome elongation states and translational regulation during cellular stress

 

The endonuclease Cue2 cleaves mRNAs at stalled ribosomes during No Go Decay



 

Stop codon context influences genome-wide stimulation of termination codon readthrough by aminoglycosides